Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4641

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4640: 13008 - KOG1399 Flavin-containing monooxygenase, at 666733 to 668799 13008 mRNA_4641: 13009 - KOG1161 Protein involved in vacuolar polyphosphate accumulation, contains SPX domain, at 669193 to 672697 13009

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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668,314 + 13008 mRNA_4640 0.76 -2.7
668,398 - 13008 mRNA_4640 0.81 -0.2
668,592 + 13008 mRNA_4640 0.90 0.4
668,746 - -1.2
668,747 - -0.8
668,878 + 0.3
668,898 - 0.1
669,789 + 13009 mRNA_4641 0.17 -0.7
670,057 + 13009 mRNA_4641 0.25 -1.6
670,183 - 13009 mRNA_4641 0.28 1.0
672,268 + 13009 mRNA_4641 0.88 -4.1
672,701 - 1.4
672,717 - -1.3
672,822 - -0.4
672,827 - -0.1
672,827 - 0.5
672,827 - -0.8
672,831 - 2.3
672,836 + 0.3
672,839 - -0.3
672,858 - 0.3
672,860 + 0.1
672,860 + 0.4
672,864 - -0.3
672,873 - 0.6
672,899 + 0.4
673,014 + -0.3
673,025 + -0.2
673,038 + 1.2
673,139 - 0.1
673,399 - -1.4
673,457 + 0.9