Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4533

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4532: 12900 - K01247 alkA DNA-3-methyladenine glycosylase II, at 396525 to 397973 12900 mRNA_4533: 12901 - Hypothetical Protein, at 398174 to 399920 12901 mRNA_4534: 12902 - K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family, at 400318 to 402345 12902

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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397,232 - 12900 mRNA_4532 0.49 0.5
397,492 + 12900 mRNA_4532 0.67 1.1
397,505 + 12900 mRNA_4532 0.68 -0.7
397,760 - 12900 mRNA_4532 0.85 1.6
398,361 - 12901 mRNA_4533 0.11 -1.0
398,489 - 12901 mRNA_4533 0.18 -1.1
398,655 - 12901 mRNA_4533 0.28 -0.0
398,703 - 12901 mRNA_4533 0.30 -3.9
398,770 + 12901 mRNA_4533 0.34 -1.2
399,123 + 12901 mRNA_4533 0.54 0.9
399,261 + 12901 mRNA_4533 0.62 1.1
399,440 + 12901 mRNA_4533 0.72 1.1
399,690 + 12901 mRNA_4533 0.87 -0.7
399,849 + 0.5
399,852 + 0.2
399,996 + -0.2
400,010 - 0.0
400,033 - -0.0
400,173 + -1.5
400,783 + 12902 mRNA_4534 0.23 0.2