Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4521

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4520: 12888 - Hypothetical Protein, at 373888 to 374415 12888 mRNA_4521: 12889 - SUPERFAMILY--SSF117018, at 374666 to 375210 12889 mRNA_4522: 12890 - KOG0967 ATP-dependent DNA ligase I, at 375338 to 377134 12890

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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373,695 - 1.0
373,761 - -0.3
373,778 - -2.0
373,813 + 1.0
373,951 + 12888 mRNA_4520 0.12 -0.5
374,405 - 0.9
374,409 - 0.1
374,431 + -1.2
374,536 + 1.3
374,552 + 1.1
374,563 - -0.2
374,647 + -0.7
374,943 - 12889 mRNA_4521 0.51 -0.8
374,944 + 12889 mRNA_4521 0.51 -1.4
374,967 - 12889 mRNA_4521 0.55 -0.6
375,137 + 12889 mRNA_4521 0.86 2.2
375,293 + 0.7
375,840 + 12890 mRNA_4522 0.28 -1.2
376,000 - 12890 mRNA_4522 0.37 -0.2