Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4519

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4518: 12886 - Hypothetical Protein, at 369280 to 370567 12886 mRNA_4519: 12887 - Hypothetical Protein, at 371547 to 373000 12887 mRNA_4520: 12888 - Hypothetical Protein, at 373888 to 374415 12888

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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370,870 - 0.9
371,323 + -3.1
371,418 + 1.4
371,990 + 12887 mRNA_4519 0.30 0.1
372,233 - 12887 mRNA_4519 0.47 0.5
372,297 + 12887 mRNA_4519 0.52 0.0
372,315 - 12887 mRNA_4519 0.53 -0.5
372,315 - 12887 mRNA_4519 0.53 -0.9
372,350 - 12887 mRNA_4519 0.55 -2.0
372,563 - 12887 mRNA_4519 0.70 0.2
372,564 - 12887 mRNA_4519 0.70 0.5
372,604 - 12887 mRNA_4519 0.73 -1.7
372,707 - 12887 mRNA_4519 0.80 -0.9
372,708 - 12887 mRNA_4519 0.80 -0.1
372,718 - 12887 mRNA_4519 0.81 0.2
372,721 + 12887 mRNA_4519 0.81 2.4
372,742 - 12887 mRNA_4519 0.82 -0.8
372,847 + 12887 mRNA_4519 0.89 0.0
372,871 - -0.7
372,878 - 0.3
372,883 + -0.8
372,895 + -0.8
372,911 - 1.2
372,919 - 0.8
372,920 + -1.8
372,924 + 0.4
372,928 + -0.8
373,045 + 0.0
373,054 + -0.9
373,073 - 0.5
373,082 + 1.2
373,085 - 0.1
373,102 + 0.1
373,185 - -2.4
373,205 - -0.2
373,227 - -1.2
373,255 + 0.2
373,445 - -0.1
373,543 - 0.1
373,569 + 0.4
373,590 + 0.8
373,593 - -0.0
373,601 + 1.4
373,618 - -1.1
373,635 + -0.5
373,695 - 1.0
373,761 - -0.3
373,778 - -2.0
373,813 + 1.0
373,951 + 12888 mRNA_4520 0.12 -0.5