Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4507

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4506: 12874 - KOG4754 Predicted phosphoglycerate mutase, at 339394 to 340797 12874 mRNA_4507: 12875 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 341056 to 342749 12875 mRNA_4508: 12876 - KOG2263 Methionine synthase II (cobalamin-independent), at 343058 to 345136 12876

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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340,149 - 12874 mRNA_4506 0.54 -0.4
340,205 - 12874 mRNA_4506 0.58 0.2
340,475 - 12874 mRNA_4506 0.77 1.3
341,187 - 0.5
341,362 + 12875 mRNA_4507 0.18 -0.1
341,592 - 12875 mRNA_4507 0.32 1.8
341,621 - 12875 mRNA_4507 0.33 0.2
341,647 + 12875 mRNA_4507 0.35 -0.2
342,351 - 12875 mRNA_4507 0.76 -0.3
342,360 - 12875 mRNA_4507 0.77 0.8
342,816 + -0.1
342,834 + -1.2
342,864 + 0.7
342,897 + -0.3
342,922 - 0.5
343,154 - 0.0
343,315 - 12876 mRNA_4508 0.12 2.9
343,593 + 12876 mRNA_4508 0.26 1.1
343,594 - 12876 mRNA_4508 0.26 0.6
343,745 + 12876 mRNA_4508 0.33 1.0