Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4496

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4495: 12863 - HMMPfam-TRAPP trafficking subunit Trs65-PF12735, at 313110 to 316762 12863 mRNA_4496: 12864 - SUPERFAMILY--SSF81383, at 317047 to 318791 12864

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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316,556 - -0.2
316,619 + -0.4
316,653 + 1.1
316,700 - 0.9
316,846 - -2.1
316,850 + 0.7
316,967 + 2.2
317,297 - 12864 mRNA_4496 0.14 0.6
317,326 - 12864 mRNA_4496 0.16 0.9
317,337 - 12864 mRNA_4496 0.17 1.0
317,422 - 12864 mRNA_4496 0.21 0.2
317,706 - 12864 mRNA_4496 0.38 -2.7
317,763 + 12864 mRNA_4496 0.41 -0.8
317,780 - 12864 mRNA_4496 0.42 0.4
318,170 + 12864 mRNA_4496 0.64 -1.5
318,733 + 0.1
319,032 + 0.5
319,162 + 0.7
319,207 - -0.7
319,323 + -1.5
319,535 + -0.3
319,751 + 3.1
319,773 + 0.6
319,775 - -2.7