Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4493

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4492: 12860 - KOG1198 Zinc-binding oxidoreductase, at 307905 to 309384 12860 mRNA_4493: 12861 - SUPERFAMILY--SSF52047, at 309576 to 311024 12861 mRNA_4494: 12862 - SUPERFAMILY--SSF52047, at 311321 to 312953 12862

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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308,597 + 12860 mRNA_4492 0.47 0.1
308,736 + 12860 mRNA_4492 0.56 -0.1
308,803 - 12860 mRNA_4492 0.61 0.6
308,898 - 12860 mRNA_4492 0.67 0.2
308,940 + 12860 mRNA_4492 0.70 -0.1
309,032 + 12860 mRNA_4492 0.76 -0.2
309,087 + 12860 mRNA_4492 0.80 -3.0
309,227 + 12860 mRNA_4492 0.89 -0.4
309,337 + -1.1
309,499 - 0.5
309,513 - -1.0
309,636 - 3.1
309,693 + -0.1
309,766 + 12861 mRNA_4493 0.13 0.4
310,345 - 12861 mRNA_4493 0.53 -0.9
310,463 - 12861 mRNA_4493 0.61 -0.4
310,789 - 12861 mRNA_4493 0.84 0.7
311,111 - 0.7
311,249 + -0.9
311,565 + 12862 mRNA_4494 0.15 -0.6
311,654 - 12862 mRNA_4494 0.20 -0.2
311,734 - 12862 mRNA_4494 0.25 0.5