Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4463

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4462: 12830 - Hypothetical Protein, at 241842 to 242730 12830 mRNA_4463: 12831 - Hypothetical Protein, at 243437 to 244042 12831 mRNA_4464: 12832 - Hypothetical Protein, at 244440 to 244979 12832

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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242,437 + 12830 mRNA_4462 0.67 -0.1
242,454 + 12830 mRNA_4462 0.69 0.0
242,465 - 12830 mRNA_4462 0.70 -0.6
242,471 - 12830 mRNA_4462 0.71 -0.7
242,477 - 12830 mRNA_4462 0.71 -0.2
242,478 + 12830 mRNA_4462 0.72 -2.1
242,495 + 12830 mRNA_4462 0.73 -0.0
242,637 + 12830 mRNA_4462 0.89 -0.2
242,638 - 12830 mRNA_4462 0.90 1.6
242,649 - 1.5
242,651 - -0.3
242,651 - 0.8
242,671 + 2.5
242,676 + -0.4
242,679 + -0.1
242,706 + 1.9
242,733 - 1.5
242,776 - 0.6
242,782 + 1.1
242,793 + -1.4
242,842 + -1.5
242,861 - 0.3
242,874 + 0.3
242,902 - 0.5
242,911 - -1.0
242,925 - 0.7
242,934 - -1.6
242,934 - -0.1
242,936 - 1.6
242,938 + 0.7
242,957 - -0.2
243,146 + -0.7
243,211 + -0.7
243,212 - 0.2
243,220 - 0.8
243,225 + -0.5
243,227 - -2.8
243,228 - -0.2
243,235 + 2.3
243,278 - 0.1
243,366 - -0.2
243,367 + 0.1
243,379 + -0.2
243,381 + 0.4
243,384 - -0.3
243,390 + -1.4
243,393 + 0.7
243,409 - 0.6
243,520 - 12831 mRNA_4463 0.14 -0.4
243,541 - 12831 mRNA_4463 0.17 -0.1
243,592 - 12831 mRNA_4463 0.26 0.8
243,633 - 12831 mRNA_4463 0.32 -1.1
243,677 - 12831 mRNA_4463 0.40 2.1
243,683 + 12831 mRNA_4463 0.41 0.4
243,689 - 12831 mRNA_4463 0.42 0.6
243,708 - 12831 mRNA_4463 0.45 -0.3
243,710 - 12831 mRNA_4463 0.45 -1.1
243,744 - 12831 mRNA_4463 0.51 0.4
243,830 + 12831 mRNA_4463 0.65 -0.3
243,834 - 12831 mRNA_4463 0.66 1.1
243,835 - 12831 mRNA_4463 0.66 0.0
243,847 - 12831 mRNA_4463 0.68 0.5
243,915 + 12831 mRNA_4463 0.79 -0.8
243,928 + 12831 mRNA_4463 0.81 2.2
243,964 + 12831 mRNA_4463 0.87 0.3
243,975 - 12831 mRNA_4463 0.89 -0.3
243,991 + -2.0
244,008 + 0.2
244,030 + -2.1
244,031 + -2.0
244,039 + 0.4
244,039 + -1.1
244,049 - -0.1
244,059 + -0.1
244,062 + 2.1
244,113 - -0.1
244,118 + 0.8
244,134 + -0.3
244,195 - 1.5
244,420 + -0.3
244,427 + -1.1
244,435 + 0.2
244,449 + 0.0
244,459 - -0.4
244,504 - 12832 mRNA_4464 0.12 -0.7
244,757 - 12832 mRNA_4464 0.59 -1.3
244,937 + 0.2
245,026 - 1.3