Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4448

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4447: 12815 - K12666 OST1, RPN1 oligosaccharyltransferase complex subunit alpha (ribophorin I), at 204059 to 206130 12815 mRNA_4448: 12816 - KOG3979 FGF receptor activating protein 1, at 206220 to 210253 12816 mRNA_4449: 12817 - K14168 CTU1, NCS6 cytoplasmic tRNA 2-thiolation protein 1, at 210344 to 212336 12817

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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206,487 + 1.1
206,930 - 12816 mRNA_4448 0.18 -0.6
206,987 + 12816 mRNA_4448 0.19 -0.2
207,076 - 12816 mRNA_4448 0.21 0.4
207,330 - 12816 mRNA_4448 0.28 0.2
207,852 + 12816 mRNA_4448 0.40 0.0
207,953 + 12816 mRNA_4448 0.43 1.8
207,974 - 12816 mRNA_4448 0.43 -0.0
208,401 - 12816 mRNA_4448 0.54 -1.0
208,554 + 12816 mRNA_4448 0.58 -2.0
209,128 - 12816 mRNA_4448 0.72 -0.0
209,291 - 12816 mRNA_4448 0.76 0.1
209,569 - 12816 mRNA_4448 0.83 -1.4
209,606 + 12816 mRNA_4448 0.84 1.1
209,864 - 0.7
209,980 + -0.1
209,986 + -1.7
209,996 - -0.9
210,013 + -1.6
210,024 + 0.0
210,032 + -0.5
210,335 + -0.9
210,615 - 12817 mRNA_4449 0.14 -1.0
210,779 - 12817 mRNA_4449 0.22 -1.5
210,908 - 12817 mRNA_4449 0.28 2.1
211,048 - 12817 mRNA_4449 0.35 0.5