Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4412

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4411: 12779 - K14790 NOP9 nucleolar protein 9, at 117633 to 120365 12779 mRNA_4412: 12780 - SUPERFAMILY--SSF52047, at 120442 to 126387 12780 mRNA_4413: 12781 - KOG0252 Inorganic phosphate transporter, at 126520 to 129077 12781

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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120,247 + -0.2
120,320 + 0.5
120,472 + 0.6
120,509 - 1.9
120,811 + -0.3
120,955 - 2.6
120,956 - 0.8
121,062 - 12780 mRNA_4412 0.10 0.3
121,491 - 12780 mRNA_4412 0.18 0.6
121,645 + 12780 mRNA_4412 0.20 0.2
121,647 + 12780 mRNA_4412 0.20 0.1
121,731 - 12780 mRNA_4412 0.22 -0.5
121,777 - 12780 mRNA_4412 0.22 -1.5
121,864 - 12780 mRNA_4412 0.24 2.1
121,916 - 12780 mRNA_4412 0.25 -0.1
122,015 + 12780 mRNA_4412 0.26 0.4
122,049 - 12780 mRNA_4412 0.27 0.3
122,059 + 12780 mRNA_4412 0.27 0.5
122,085 - 12780 mRNA_4412 0.28 -2.0
122,096 + 12780 mRNA_4412 0.28 -0.7
122,098 + 12780 mRNA_4412 0.28 -1.0
122,211 - 12780 mRNA_4412 0.30 -0.3
122,489 - 12780 mRNA_4412 0.34 1.2
122,621 - 12780 mRNA_4412 0.37 -0.4
122,808 + 12780 mRNA_4412 0.40 0.1
122,988 + 12780 mRNA_4412 0.43 -0.3
123,235 + 12780 mRNA_4412 0.47 -0.4
123,280 + 12780 mRNA_4412 0.48 -1.7
123,547 + 12780 mRNA_4412 0.52 1.3
123,571 - 12780 mRNA_4412 0.53 0.8
123,591 + 12780 mRNA_4412 0.53 0.7
123,715 + 12780 mRNA_4412 0.55 0.3
123,842 + 12780 mRNA_4412 0.57 -1.1
123,862 + 12780 mRNA_4412 0.58 2.0
123,862 + 12780 mRNA_4412 0.58 1.3
124,015 + 12780 mRNA_4412 0.60 -0.7
124,048 + 12780 mRNA_4412 0.61 0.5
124,099 + 12780 mRNA_4412 0.62 2.8
124,102 - 12780 mRNA_4412 0.62 0.2
124,116 - 12780 mRNA_4412 0.62 -0.0
124,133 - 12780 mRNA_4412 0.62 -0.8
124,177 - 12780 mRNA_4412 0.63 -0.9
124,237 - 12780 mRNA_4412 0.64 0.5
124,280 + 12780 mRNA_4412 0.65 -0.9
124,388 - 12780 mRNA_4412 0.66 0.6
124,388 + 12780 mRNA_4412 0.66 0.1
124,445 - 12780 mRNA_4412 0.67 -0.6
124,539 + 12780 mRNA_4412 0.69 -0.1
124,568 - 12780 mRNA_4412 0.69 0.3
124,626 - 12780 mRNA_4412 0.70 -1.4
124,810 + 12780 mRNA_4412 0.73 2.2
124,865 + 12780 mRNA_4412 0.74 0.3
125,004 + 12780 mRNA_4412 0.77 0.4
125,016 + 12780 mRNA_4412 0.77 2.9
125,039 - 12780 mRNA_4412 0.77 -0.1
125,039 - 12780 mRNA_4412 0.77 -1.4
125,039 - 12780 mRNA_4412 0.77 -0.3
125,045 + 12780 mRNA_4412 0.77 -0.7
125,164 + 12780 mRNA_4412 0.79 -0.3
125,795 - 0.3
125,803 + -0.2
125,806 - 0.9
125,871 + 0.9
126,051 + -0.1
126,051 - -1.4
126,057 + -0.3
126,157 - -0.5
126,240 + 1.9
126,358 + -2.7
126,492 - -0.1
126,506 + 1.1
126,527 + 1.2
126,600 - 2.9
126,817 - 12781 mRNA_4413 0.12 -0.1
126,880 + 12781 mRNA_4413 0.14 -1.3
126,957 + 12781 mRNA_4413 0.17 -2.1
127,029 + 12781 mRNA_4413 0.20 -0.3
127,209 + 12781 mRNA_4413 0.27 -0.1
127,275 + 12781 mRNA_4413 0.30 -0.7