Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4402

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4401: 12769 - KOG3303 Predicted alpha-helical protein, potentially involved in replication/repair, at 97723 to 98507 12769 mRNA_4402: 12770 - Hypothetical Protein, at 98627 to 98893 12770 mRNA_4403: 12771 - Hypothetical Protein, at 99143 to 102687 12771

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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98,550 - 0.4
98,662 + 12770 mRNA_4402 0.13 -0.8
98,697 + 12770 mRNA_4402 0.26 0.7
98,697 + 12770 mRNA_4402 0.26 0.0
98,709 + 12770 mRNA_4402 0.31 -0.3
98,836 - 12770 mRNA_4402 0.78 0.5
98,981 - -1.5
99,140 - -2.1
99,145 - 0.5
99,146 - -0.1
99,157 + -0.8
99,169 + -0.1
99,185 + -0.1
99,200 + 0.8
99,266 + -0.6
99,268 + 2.3
99,276 + -0.7
99,310 + 0.3
99,335 + 0.3
99,444 - 0.2
99,465 - -0.7
99,475 - 0.0
99,480 + -0.1
99,632 - 12771 mRNA_4403 0.14 -2.5