Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4400

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4399: 12767 - HMMPfam-CFEM domain-PF05730, at 93703 to 94660 12767 mRNA_4400: 12768 - Hypothetical Protein, at 95230 to 97148 12768 mRNA_4401: 12769 - KOG3303 Predicted alpha-helical protein, potentially involved in replication/repair, at 97723 to 98507 12769

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
94,273 + 12767 mRNA_4399 0.59 0.2
94,433 - 12767 mRNA_4399 0.76 0.3
94,445 + 12767 mRNA_4399 0.77 0.5
94,459 - 12767 mRNA_4399 0.79 0.8
94,574 - -0.6
94,604 - 0.8
95,006 + 2.3
95,145 + 0.2
95,163 + -0.1
95,172 + -0.4
95,273 + 0.9
95,468 + 12768 mRNA_4400 0.12 0.5
96,195 + 12768 mRNA_4400 0.50 -0.1
96,718 + 12768 mRNA_4400 0.78 -1.0
96,941 - 12768 mRNA_4400 0.89 -0.3
96,965 + -1.1
96,986 - -1.0
97,076 - 3.0
97,135 + 1.9
97,146 + 1.3
97,251 + -1.1
97,337 - 2.8
97,411 + -0.0
97,484 + 1.2
97,513 + -0.6