Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4383

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4382: 12750 - Hypothetical Protein, at 61848 to 63283 12750 mRNA_4383: 12751 - Hypothetical Protein, at 63561 to 65177 12751 mRNA_4384: 12752 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 65499 to 68176 12752

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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62,785 - 12750 mRNA_4382 0.65 0.7
62,792 + 12750 mRNA_4382 0.66 -0.9
63,062 + 12750 mRNA_4382 0.85 -0.3
63,066 - 12750 mRNA_4382 0.85 -0.5
63,067 + 12750 mRNA_4382 0.85 -0.1
63,071 - 12750 mRNA_4382 0.85 0.0
63,130 - 12750 mRNA_4382 0.89 0.8
63,207 - -0.5
63,354 + 0.5
63,394 - 0.8
63,394 - 0.0
63,498 - -0.8
63,510 - 3.2
63,516 + 1.0
63,516 + -1.3
63,531 + -0.1
63,953 + 12751 mRNA_4383 0.24 -0.2
64,638 - 12751 mRNA_4383 0.67 -1.5
64,656 - 12751 mRNA_4383 0.68 -0.4
64,809 - 12751 mRNA_4383 0.77 0.1
64,829 + 12751 mRNA_4383 0.78 1.0
64,830 - 12751 mRNA_4383 0.78 -0.3
64,974 - 12751 mRNA_4383 0.87 1.2
65,093 + 0.2
65,101 - -0.4
65,128 - 2.7
65,136 + 0.2
65,266 + -1.8
65,323 - 1.7
65,390 - 0.2
65,392 + 0.1
65,434 + -0.7
65,439 + 1.6
65,441 + -0.3
65,443 - -0.3
65,728 - -1.3
65,875 - 12752 mRNA_4384 0.14 -0.2
65,951 + 12752 mRNA_4384 0.17 -0.1
65,960 + 12752 mRNA_4384 0.17 -1.4
66,171 - 12752 mRNA_4384 0.25 -0.1