Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4381

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4380: 12748 - K00550 OPI3 methylene-fatty-acyl-phospholipid synthase, at 58451 to 59547 12748 mRNA_4381: 12749 - BLAST glycosyltransferase family 25 [Puccinia cf. psidii AE..., at 59708 to 61504 12749 mRNA_4382: 12750 - Hypothetical Protein, at 61848 to 63283 12750

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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58,710 - 12748 mRNA_4380 0.24 -0.8
58,716 + 12748 mRNA_4380 0.24 -3.3
58,985 + 12748 mRNA_4380 0.49 -0.7
59,174 + 12748 mRNA_4380 0.66 -2.5
59,174 + 12748 mRNA_4380 0.66 -0.9
59,177 - 12748 mRNA_4380 0.66 0.3
59,283 - 12748 mRNA_4380 0.76 -0.3
59,431 - 12748 mRNA_4380 0.89 -2.0
59,446 + -1.3
59,723 + -0.8
59,913 + 12749 mRNA_4381 0.11 0.5
60,110 - 12749 mRNA_4381 0.22 0.8
60,328 + 12749 mRNA_4381 0.35 0.0
60,450 - 12749 mRNA_4381 0.41 0.6
60,731 + 12749 mRNA_4381 0.57 -1.3
60,758 - 12749 mRNA_4381 0.58 2.2
60,879 + 12749 mRNA_4381 0.65 -1.2
61,044 + 12749 mRNA_4381 0.74 -0.1
61,057 - 12749 mRNA_4381 0.75 0.9
61,173 + 12749 mRNA_4381 0.82 2.0
61,200 - 12749 mRNA_4381 0.83 0.8
61,299 - 12749 mRNA_4381 0.89 -1.0
61,304 - 12749 mRNA_4381 0.89 0.8
61,603 + -1.4
61,629 - -1.6
61,633 - -0.4
62,159 - 12750 mRNA_4382 0.22 -1.3