Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4369

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4369: 12737 - K03671 trxA thioredoxin 1, at 29253 to 29815 12737 mRNA_4370: 12738 - HMMPfam-Purine nucleoside permease (NUP)-PF06516,PIRSF--PIRSF013171, at 30221 to 32027 12738

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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28,357 - 1.5
28,362 + 1.1
28,481 + 0.0
28,533 + 0.8
28,680 + -0.4
28,784 - -0.4
28,862 - 0.8
28,867 + 0.9
28,867 + 0.5
28,870 - -1.5
28,878 - 0.9
29,035 - 1.4
29,094 + 0.4
29,103 + 0.2
29,218 - 2.1
29,668 - 12737 mRNA_4369 0.74 -1.5
29,839 + -0.3
30,499 - 12738 mRNA_4370 0.15 1.5
30,508 - 12738 mRNA_4370 0.16 1.0