Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4360

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4359: 12727 - Hypothetical Protein, at 194 to 736 12727 mRNA_4360: 12728 - Hypothetical Protein, at 964 to 3087 12728

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
1 + 0.9
34 + -0.2
36 + 0.9
40 + 1.3
106 - -0.7
115 + 0.3
156 - -0.4
162 + -0.8
170 + 0.6
318 + 12727 mRNA_4359 0.23 -0.1
397 + 12727 mRNA_4359 0.37 1.9
440 + 12727 mRNA_4359 0.45 1.4
450 + 12727 mRNA_4359 0.47 0.9
491 + 12727 mRNA_4359 0.55 0.9
494 - 12727 mRNA_4359 0.55 -0.3
500 - 12727 mRNA_4359 0.56 0.8
513 + 12727 mRNA_4359 0.59 -0.3
527 - 12727 mRNA_4359 0.61 0.2
535 + 12727 mRNA_4359 0.63 1.3
537 - 12727 mRNA_4359 0.63 -0.0
573 - 12727 mRNA_4359 0.70 -1.0
575 - 12727 mRNA_4359 0.70 -1.5
575 - 12727 mRNA_4359 0.70 0.6
585 + 12727 mRNA_4359 0.72 0.6
627 - 12727 mRNA_4359 0.80 -1.1
629 + 12727 mRNA_4359 0.80 -0.0
632 + 12727 mRNA_4359 0.81 1.5
655 + 12727 mRNA_4359 0.85 0.1
657 - 12727 mRNA_4359 0.85 2.0
666 + 12727 mRNA_4359 0.87 -1.9
837 + 0.2
866 + -1.0
966 + -1.0
1,080 + -0.7
1,091 + -0.0
1,091 + -0.3
1,092 + 0.0
1,119 + 0.4
1,180 - 12728 mRNA_4360 0.10 -0.3
1,185 - 12728 mRNA_4360 0.10 -3.0
1,186 + 12728 mRNA_4360 0.10 1.0
1,262 + 12728 mRNA_4360 0.14 -0.4
1,362 + 12728 mRNA_4360 0.19 -0.2
1,365 - 12728 mRNA_4360 0.19 -0.2
1,368 - 12728 mRNA_4360 0.19 -1.2
1,381 + 12728 mRNA_4360 0.20 0.9
1,539 - 12728 mRNA_4360 0.27 -0.0
1,589 + 12728 mRNA_4360 0.29 1.4
1,630 + 12728 mRNA_4360 0.31 -0.8
1,688 + 12728 mRNA_4360 0.34 0.2
1,692 + 12728 mRNA_4360 0.34 0.0
1,698 - 12728 mRNA_4360 0.35 -0.4
1,699 + 12728 mRNA_4360 0.35 0.4
1,763 + 12728 mRNA_4360 0.38 0.6
1,788 + 12728 mRNA_4360 0.39 0.3
1,796 + 12728 mRNA_4360 0.39 0.4
1,867 + 12728 mRNA_4360 0.43 -0.8
2,010 + 12728 mRNA_4360 0.49 -1.1
2,037 + 12728 mRNA_4360 0.51 -1.3
2,077 - 12728 mRNA_4360 0.52 -0.2
2,125 + 12728 mRNA_4360 0.55 0.8
2,128 - 12728 mRNA_4360 0.55 -0.3
2,222 + 12728 mRNA_4360 0.59 -0.1
2,224 - 12728 mRNA_4360 0.59 -1.2
2,280 + 12728 mRNA_4360 0.62 -1.2
2,303 + 12728 mRNA_4360 0.63 2.0
2,354 + 12728 mRNA_4360 0.65 0.3
2,357 - 12728 mRNA_4360 0.66 -0.8
2,378 - 12728 mRNA_4360 0.67 0.2
2,396 + 12728 mRNA_4360 0.67 -0.6
2,447 - 12728 mRNA_4360 0.70 -0.3
2,549 + 12728 mRNA_4360 0.75 0.2
2,681 + 12728 mRNA_4360 0.81 0.4
2,991 + 0.7
3,097 - -1.0
3,106 + -2.1
3,107 + -1.4
3,152 + 1.3
3,276 + -0.0
3,398 + -0.0
3,399 + 0.8
3,417 + 0.6
3,516 + 0.5
3,568 - -1.9
3,574 - -0.4
3,578 + 0.0
3,632 + -0.4
3,691 + -1.3
3,692 - 0.1
3,695 - -1.0
3,719 - -0.5
3,759 + 0.3
3,775 + -0.6
3,843 - 0.5
3,845 - -0.7
3,845 - 0.5
3,850 + -1.5
3,852 + -2.0
3,859 + 0.1