Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4311

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4310: 12678 - Hypothetical Protein, at 1869804 to 1870732 12678 mRNA_4311: 12679 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1871277 to 1872200 12679 mRNA_4312: 12680 - K14802 DRS2, ATP8A phospholipid-transporting ATPase, at 1872591 to 1877235 12680

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,870,354 + 12678 mRNA_4310 0.59 0.5
1,870,486 - 12678 mRNA_4310 0.73 -1.4
1,870,625 + 12678 mRNA_4310 0.88 -0.4
1,870,647 + -0.7
1,870,761 + 0.7
1,870,771 + 0.8
1,870,783 - -0.7
1,870,785 + -0.0
1,870,788 - -1.7
1,870,812 + -1.5
1,870,967 + 1.7
1,871,079 + -2.1
1,871,083 - -0.8
1,871,102 + 0.5
1,871,524 - 12679 mRNA_4311 0.27 -1.6
1,871,611 + 12679 mRNA_4311 0.36 2.6
1,871,676 + 12679 mRNA_4311 0.43 -0.8
1,871,813 - 12679 mRNA_4311 0.58 -1.5
1,871,853 - 12679 mRNA_4311 0.62 0.2
1,871,867 - 12679 mRNA_4311 0.64 1.1
1,871,966 - 12679 mRNA_4311 0.75 0.5
1,872,127 + -1.3
1,872,223 - -0.1
1,872,223 - 0.9
1,872,277 - -2.4
1,872,314 + -0.7
1,872,421 + -3.0
1,872,573 - -0.6
1,872,647 - 0.3
1,872,885 + 1.4
1,872,920 + 1.4
1,873,047 + -0.6
1,873,143 - 12680 mRNA_4312 0.12 -3.4