Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4310

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4310: 12678 - Hypothetical Protein, at 1869804 to 1870732 12678 mRNA_4311: 12679 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1871277 to 1872200 12679

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,869,043 - 1.9
1,869,141 - -0.2
1,869,141 - -2.4
1,869,311 - 0.4
1,869,476 + -0.9
1,869,625 - -0.3
1,870,354 + 12678 mRNA_4310 0.59 0.5
1,870,486 - 12678 mRNA_4310 0.73 -1.4
1,870,625 + 12678 mRNA_4310 0.88 -0.4
1,870,647 + -0.7
1,870,761 + 0.7
1,870,771 + 0.8
1,870,783 - -0.7
1,870,785 + -0.0
1,870,788 - -1.7
1,870,812 + -1.5
1,870,967 + 1.7
1,871,079 + -2.1
1,871,083 - -0.8
1,871,102 + 0.5
1,871,524 - 12679 mRNA_4311 0.27 -1.6
1,871,611 + 12679 mRNA_4311 0.36 2.6
1,871,676 + 12679 mRNA_4311 0.43 -0.8