Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4288

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4287: 12655 - K14559 MPP10 U3 small nucleolar RNA-associated protein MPP10, at 1808511 to 1811471 12655 mRNA_4288: 12656 - Hypothetical Protein, at 1811601 to 1812350 12656 mRNA_4289: 12657 - K15445 TRMT10A, TRM10, RG9MTD2 tRNA (guanine9-N1)-methyltransferase, at 1812694 to 1814089 12657

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,811,537 + -0.3
1,811,541 - 2.2
1,811,608 - -0.4
1,811,679 + 12656 mRNA_4288 0.10 0.2
1,811,975 - 12656 mRNA_4288 0.50 0.7
1,812,022 + 12656 mRNA_4288 0.56 -0.8
1,812,096 + 12656 mRNA_4288 0.66 -0.7
1,812,267 - 12656 mRNA_4288 0.89 0.2
1,812,425 + -0.6
1,812,544 - 1.2
1,812,545 - -0.8
1,812,548 + -1.1
1,812,570 + 1.5
1,812,578 + 0.7
1,812,613 - -1.5
1,812,614 + 0.1
1,812,616 - 1.4
1,812,616 - -1.1
1,812,704 - -0.3
1,813,132 - 12657 mRNA_4289 0.31 -0.5
1,813,164 + 12657 mRNA_4289 0.34 -2.9