Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4162

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4161: 12529 - SUPERFAMILY--SSF52833, at 1503863 to 1504762 12529 mRNA_4162: 12530 - Hypothetical Protein, at 1505110 to 1508834 12530 mRNA_4163: 12531 - Hypothetical Protein, at 1509343 to 1510830 12531

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,504,138 + 12529 mRNA_4161 0.31 -0.5
1,504,215 - 12529 mRNA_4161 0.39 0.1
1,504,224 + 12529 mRNA_4161 0.40 -2.3
1,504,275 + 12529 mRNA_4161 0.46 -1.3
1,504,380 + 12529 mRNA_4161 0.57 0.3
1,504,407 - 12529 mRNA_4161 0.60 -0.2
1,504,514 - 12529 mRNA_4161 0.72 -2.0
1,504,551 - 12529 mRNA_4161 0.76 0.2
1,504,881 + -0.8
1,505,272 - -0.3
1,505,584 - 12530 mRNA_4162 0.13 -1.3
1,505,636 - 12530 mRNA_4162 0.14 -0.0
1,505,734 - 12530 mRNA_4162 0.17 1.0
1,506,081 - 12530 mRNA_4162 0.26 -0.1
1,506,174 - 12530 mRNA_4162 0.29 -0.7
1,507,139 - 12530 mRNA_4162 0.54 0.2
1,507,421 - 12530 mRNA_4162 0.62 -1.5
1,507,433 - 12530 mRNA_4162 0.62 -0.3
1,507,858 + 12530 mRNA_4162 0.74 0.7
1,508,253 + 12530 mRNA_4162 0.84 -0.8
1,508,567 + -0.1
1,508,595 - -0.2
1,508,723 - 0.2
1,508,732 - -2.2
1,508,747 + 1.3
1,508,883 - 0.6
1,508,890 + -1.7
1,508,893 - 0.6
1,508,910 - -0.0
1,508,972 - 0.1
1,509,032 - -0.6
1,509,170 - -1.5
1,509,482 + -0.3
1,509,522 + 12531 mRNA_4163 0.12 1.5
1,509,616 + 12531 mRNA_4163 0.18 -0.8