Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4161

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4160: 12528 - Hypothetical Protein, at 1502461 to 1503563 12528 mRNA_4161: 12529 - SUPERFAMILY--SSF52833, at 1503863 to 1504762 12529 mRNA_4162: 12530 - Hypothetical Protein, at 1505110 to 1508834 12530

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,503,315 - 12528 mRNA_4160 0.77 -3.3
1,503,477 - -0.2
1,503,482 + 0.4
1,503,493 + -1.5
1,503,608 + 2.3
1,503,610 + 0.9
1,503,626 + 1.4
1,503,778 - 0.2
1,503,933 - -1.9
1,504,138 + 12529 mRNA_4161 0.31 -0.5
1,504,215 - 12529 mRNA_4161 0.39 0.1
1,504,224 + 12529 mRNA_4161 0.40 -2.3
1,504,275 + 12529 mRNA_4161 0.46 -1.3
1,504,380 + 12529 mRNA_4161 0.57 0.3
1,504,407 - 12529 mRNA_4161 0.60 -0.2
1,504,514 - 12529 mRNA_4161 0.72 -2.0
1,504,551 - 12529 mRNA_4161 0.76 0.2
1,504,881 + -0.8
1,505,272 - -0.3
1,505,584 - 12530 mRNA_4162 0.13 -1.3
1,505,636 - 12530 mRNA_4162 0.14 -0.0
1,505,734 - 12530 mRNA_4162 0.17 1.0