Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4151

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4150: 12518 - K15101 SLC25A2_15, ORNT solute carrier family 25 (mitochondrial ornithine transporter) member 2/15, at 1474774 to 1476217 12518 mRNA_4151: 12519 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1476437 to 1477857 12519 mRNA_4152: 12520 - K15026 EIF2A translation initiation factor 2A, at 1478311 to 1480762 12520

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,475,762 + 12518 mRNA_4150 0.68 -2.7
1,475,767 + 12518 mRNA_4150 0.69 -1.9
1,475,794 + 12518 mRNA_4150 0.71 -0.2
1,475,941 - 12518 mRNA_4150 0.81 -2.2
1,475,942 + 12518 mRNA_4150 0.81 0.3
1,476,013 + 12518 mRNA_4150 0.86 -2.6
1,476,189 + -1.7
1,476,241 - 0.7
1,476,363 + 0.2
1,476,428 + 0.1
1,476,501 - -3.3
1,476,644 - 12519 mRNA_4151 0.15 0.2
1,476,655 - 12519 mRNA_4151 0.15 0.2
1,477,542 + 12519 mRNA_4151 0.78 0.2
1,477,678 + 12519 mRNA_4151 0.87 0.2
1,478,096 - 0.0
1,478,141 + -2.0
1,478,245 - -1.5
1,478,260 + 0.2
1,478,264 + 0.7