Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4128

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4127: 12495 - K00793 ribE, RIB5 riboflavin synthase, at 1415327 to 1416353 12495 mRNA_4128: 12496 - K02926 RP-L4, MRPL4, rplD large subunit ribosomal protein L4, at 1416418 to 1417570 12496 mRNA_4129: 12497 - K03949 NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 5, at 1418367 to 1418907 12497

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,416,535 + 12496 mRNA_4128 0.10 0.5
1,416,548 - 12496 mRNA_4128 0.11 -0.4
1,416,563 - 12496 mRNA_4128 0.13 -1.1
1,417,588 - -1.4
1,417,588 - 0.6
1,417,588 - -0.4
1,417,591 - 0.2
1,417,602 + -1.8
1,417,605 + -2.3
1,417,612 + 2.1
1,417,683 - -0.9
1,417,788 + -0.1
1,417,850 - -0.4
1,417,850 + -0.5
1,417,910 + 1.1
1,418,017 + -1.2
1,418,032 - 0.8
1,418,070 + 0.1
1,418,281 - -0.4
1,418,313 - 2.1
1,418,317 - -0.4
1,418,320 - -0.8
1,418,320 - -0.5
1,418,322 + 0.2
1,418,326 - -0.2
1,418,326 + 0.4