Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4031

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4030: 12398 - Hypothetical Protein, at 1193422 to 1193864 12398 mRNA_4031: 12399 - K08726 EPHX2 soluble epoxide hydrolase / lipid-phosphate phosphatase, at 1194331 to 1195759 12399

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,193,519 - 12398 mRNA_4030 0.22 0.5
1,193,969 + -0.3
1,193,979 + -2.1
1,193,990 + 1.1
1,194,035 - -0.1
1,194,113 - -1.9
1,194,135 - 0.1
1,194,161 + -0.6
1,194,270 + 0.1
1,194,301 + 0.2
1,194,430 + -3.0
1,194,542 - 12399 mRNA_4031 0.15 2.8
1,194,578 - 12399 mRNA_4031 0.17 -1.6
1,194,608 - 12399 mRNA_4031 0.19 -0.2
1,194,726 - 12399 mRNA_4031 0.28 0.2
1,194,999 + 12399 mRNA_4031 0.47 -1.6
1,195,015 + 12399 mRNA_4031 0.48 0.2
1,195,297 + 12399 mRNA_4031 0.68 -1.0
1,195,311 - 12399 mRNA_4031 0.69 0.3
1,195,420 - 12399 mRNA_4031 0.76 -0.3
1,195,450 + 12399 mRNA_4031 0.78 0.5
1,195,712 + -0.1
1,195,722 + -1.2
1,195,728 - 0.0
1,195,738 + -0.8
1,195,802 + -3.5
1,195,829 - -0.9
1,195,829 - -0.2
1,195,854 + -2.1
1,195,872 + -0.7
1,195,954 - 0.4
1,195,961 + 0.4
1,195,966 - -1.5
1,195,986 + 0.5
1,195,990 + -0.3
1,195,992 + -0.3
1,195,994 - 0.2
1,196,000 - 0.2
1,196,005 - 1.5
1,196,011 - -0.6
1,196,023 + 0.7
1,196,029 - -0.6
1,196,069 + -0.1
1,196,071 - -0.6
1,196,075 + 0.1
1,196,095 + 1.1
1,196,108 + 0.9
1,196,109 - -1.3
1,196,125 + 0.2
1,196,128 + 1.0
1,196,133 + -0.2
1,196,137 + 0.4
1,196,148 + -1.4
1,196,158 + 1.3
1,196,165 + 0.1
1,196,181 - -0.1
1,196,198 + 1.3
1,196,283 - -1.2
1,196,290 - -0.4
1,196,293 + -0.9
1,196,303 - -0.1
1,196,328 - -1.8
1,196,456 - 0.6
1,196,457 + 0.8
1,196,608 - -0.9
1,196,610 + 0.0
1,196,632 - 1.7