Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3893

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3892: 12260 - Hypothetical Protein, at 837987 to 839368 12260 mRNA_3893: 12261 - K07375 TUBB tubulin beta, at 839639 to 842065 12261 mRNA_3894: 12262 - SUPERFAMILY--SSF54695, at 842449 to 843578 12262

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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838,801 - 12260 mRNA_3892 0.59 2.5
838,911 - 12260 mRNA_3892 0.67 0.2
838,921 + 12260 mRNA_3892 0.68 -0.4
839,189 + 12260 mRNA_3892 0.87 -1.9
839,215 - 12260 mRNA_3892 0.89 0.5
839,218 + 12260 mRNA_3892 0.89 -0.3
839,255 + -1.9
839,642 - -2.3
839,682 + -1.1
839,911 + 12261 mRNA_3893 0.11 0.7
840,039 + 12261 mRNA_3893 0.16 1.3
840,957 + 12261 mRNA_3893 0.54 -0.1
840,970 - 12261 mRNA_3893 0.55 0.0
841,210 + 12261 mRNA_3893 0.65 0.0
841,210 + 12261 mRNA_3893 0.65 0.5
841,268 + 12261 mRNA_3893 0.67 -2.2
841,690 + 12261 mRNA_3893 0.85 -0.4
841,839 - -1.8
841,853 + -1.6
842,129 - -1.5
842,143 + -0.6
842,151 + -0.6
842,165 + -0.9
842,169 + -1.1
842,172 + 0.1
842,750 + 12262 mRNA_3894 0.27 1.5
842,769 + 12262 mRNA_3894 0.28 -1.4
842,850 + 12262 mRNA_3894 0.35 -0.6
842,899 + 12262 mRNA_3894 0.40 0.7