Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3844

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3843: 12211 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 719514 to 723213 12211 mRNA_3844: 12212 - HMMPfam-Afadin- and alpha -actinin-Binding-PF11559, at 723329 to 725612 12212 mRNA_3845: 12213 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 726085 to 727619 12213

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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722,347 + 12211 mRNA_3843 0.77 0.3
722,480 - 12211 mRNA_3843 0.80 0.3
722,503 + 12211 mRNA_3843 0.81 0.2
722,505 + 12211 mRNA_3843 0.81 -0.4
722,732 - 12211 mRNA_3843 0.87 2.0
722,776 + 12211 mRNA_3843 0.88 -0.9
722,943 + -0.9
723,055 - 0.0
723,639 - 12212 mRNA_3844 0.14 1.3
723,696 - 12212 mRNA_3844 0.16 -0.7
724,082 - 12212 mRNA_3844 0.33 -0.3
724,108 + 12212 mRNA_3844 0.34 -0.3
724,141 + 12212 mRNA_3844 0.36 -1.3
724,366 - 12212 mRNA_3844 0.45 -0.2
724,390 - 12212 mRNA_3844 0.46 -0.7
724,427 + 12212 mRNA_3844 0.48 0.7
724,517 - 12212 mRNA_3844 0.52 0.5
724,804 + 12212 mRNA_3844 0.65 -2.4
725,810 - -0.3
725,826 - 0.9
725,831 - 1.4
725,966 - -0.8
725,990 - 0.2
726,093 + -2.8
726,278 + 12213 mRNA_3845 0.13 -0.3
726,552 - 12213 mRNA_3845 0.30 1.0
726,565 - 12213 mRNA_3845 0.31 -1.0
726,597 + 12213 mRNA_3845 0.33 -1.9