Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3833

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3832: 12200 - Hypothetical Protein, at 690949 to 691867 12200 mRNA_3833: 12201 - K15196 BRF1, GTF3B transcription factor IIIB 90 kDa subunit, at 692168 to 694484 12201 mRNA_3834: 12202 - Hypothetical Protein, at 695407 to 697402 12202

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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691,193 - 12200 mRNA_3832 0.27 -0.4
691,202 + 12200 mRNA_3832 0.28 -1.7
691,813 + -0.3
691,917 - -0.3
691,919 - -0.3
691,927 + 0.6
691,928 - -0.5
691,936 + -1.4
691,949 - -1.9
691,973 - 0.2
691,996 - -0.1
692,113 + -0.2
692,205 - -0.3
692,399 + 0.9
692,401 + 12201 mRNA_3833 0.10 0.6
692,403 - 12201 mRNA_3833 0.10 -0.9
694,855 - -2.2
694,876 + -1.6
694,992 - -0.9
695,007 - 0.9
695,036 + -0.0
695,141 - 0.5
695,154 + -0.7
695,213 + -0.7