Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3812

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3811: 12179 - Hypothetical Protein, at 635575 to 638591 12179 mRNA_3812: 12180 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 638841 to 639831 12180 mRNA_3813: 12181 - BLAST zinc finger, C3HC4 type (RING finger) protein [Rhizoc..., at 640122 to 642119 12181

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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638,387 - -0.4
638,548 + -0.5
638,683 - -2.5
638,708 - -1.0
638,723 - 0.4
638,732 + 0.2
638,752 + -0.2
638,810 - 0.0
639,118 + 12180 mRNA_3812 0.28 0.4
639,312 - 12180 mRNA_3812 0.48 0.7
639,452 + 12180 mRNA_3812 0.62 -0.4
639,578 + 12180 mRNA_3812 0.74 -0.5
639,604 - 12180 mRNA_3812 0.77 -0.3
639,613 - 12180 mRNA_3812 0.78 0.7
639,728 + 12180 mRNA_3812 0.90 0.1
639,743 - 0.4
639,884 + 0.3
639,887 - 1.6
639,894 + 0.1
640,040 - -0.1
640,042 - 0.2
640,186 + 0.0
640,197 - 0.1
640,474 + 12181 mRNA_3813 0.18 -1.4