Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3795

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3793: 12161 - K15528 FAAH fatty acid amide hydrolase, at 594813 to 596952 12161 mRNA_3794: 12162 - KOG4618 Uncharacterized conserved protein, at 597131 to 597697 12162 mRNA_3795: 12163 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 597927 to 600358 12163 mRNA_3796: 12164 - Hypothetical Protein, at 600483 to 601004 12164 mRNA_3797: 12165 - Hypothetical Protein, at 601185 to 602135 12165

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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597,206 - 12162 mRNA_3794 0.13 -0.5
597,617 - 12162 mRNA_3794 0.86 0.1
597,767 - -0.5
597,776 - -0.3
597,782 - -1.1
597,792 - -1.3
597,792 - 0.1
597,798 - 1.4
598,078 - -0.5
598,090 + -0.4
598,534 + 12163 mRNA_3795 0.25 0.2
598,770 + 12163 mRNA_3795 0.35 0.6
599,098 + 12163 mRNA_3795 0.48 2.2
599,273 + 12163 mRNA_3795 0.55 0.3
599,569 + 12163 mRNA_3795 0.68 -2.2
599,941 - 12163 mRNA_3795 0.83 -0.6
600,315 + 1.2
600,494 + 0.4
600,723 - 12164 mRNA_3796 0.46 -0.1
600,732 - 12164 mRNA_3796 0.48 -0.7
600,765 + 12164 mRNA_3796 0.54 0.2
601,039 - 0.2
601,044 + 0.4
601,045 + -1.2
601,053 - -0.4
601,061 + 0.5
601,064 + -0.5
601,071 + 1.2
601,318 + 12165 mRNA_3797 0.14 -2.8
601,338 - 12165 mRNA_3797 0.16 -0.3
601,349 + 12165 mRNA_3797 0.17 1.5