Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3761

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3760: 12128 - K10746 EXO1 exonuclease 1, at 521061 to 522364 12128 mRNA_3761: 12129 - K20520 DBNL, ABP1 drebrin-like protein, at 522660 to 525046 12129 mRNA_3762: 12130 - Hypothetical Protein, at 525460 to 525822 12130

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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521,800 + 12128 mRNA_3760 0.57 -0.4
521,862 - 12128 mRNA_3760 0.61 1.0
522,152 + 12128 mRNA_3760 0.84 1.3
522,257 - 0.3
522,575 + 1.4
522,594 + 1.4
522,732 - -0.1
522,868 - -0.3
522,884 + -0.1
523,214 - 12129 mRNA_3761 0.23 -1.7
523,594 - 12129 mRNA_3761 0.39 -0.2
524,205 - 12129 mRNA_3761 0.65 -2.0
524,464 - 12129 mRNA_3761 0.76 0.1
524,782 + 12129 mRNA_3761 0.89 -0.6
524,913 - 0.9
524,933 + -1.1
524,934 + -0.0
524,945 + 0.8
525,083 - -0.8
525,088 + -0.5
525,171 - 1.0
525,252 - -0.5
525,269 + -0.0
525,377 + -0.6
525,566 + 12130 mRNA_3762 0.29 0.3
525,844 + -1.0
525,949 - -1.1