Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3746

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3745: 12113 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 486209 to 486880 12113 mRNA_3746: 12114 - Hypothetical Protein, at 487127 to 488004 12114 mRNA_3747: 12115 - Hypothetical Protein, at 488754 to 489655 12115

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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486,346 - 12113 mRNA_3745 0.20 -0.4
486,937 - 0.4
486,965 + -0.9
487,072 - -2.2
487,090 - -0.2
487,231 - 12114 mRNA_3746 0.12 -1.0
487,672 + 12114 mRNA_3746 0.62 -1.2
487,797 + 12114 mRNA_3746 0.76 0.0
487,955 - -0.6
487,978 + -0.5
488,005 - -1.5
488,106 + -0.4
488,157 - -1.6
488,252 + 0.4
488,261 - 2.3
488,388 - -0.3
488,712 + -0.9
488,836 + -0.4
488,846 + 12115 mRNA_3747 0.10 0.0
488,863 + 12115 mRNA_3747 0.12 1.9
488,866 - 12115 mRNA_3747 0.12 -2.1
488,880 - 12115 mRNA_3747 0.14 -1.2