Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3727

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3726: 12094 - K04082 hscB, HSCB, HSC20 molecular chaperone HscB, at 438498 to 439465 12094 mRNA_3727: 12095 - SMART-Leucine rich repeat, ribonuclease inhibitor type-SM00368,SUPERFAMILY--SSF52047, at 439950 to 441597 12095 mRNA_3728: 12096 - K11142 LAP3 cytosol aminopeptidase, at 441671 to 443858 12096

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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439,417 - 1.7
439,593 - -0.3
439,597 + -1.9
439,642 + 0.5
439,683 - -0.6
439,704 - 1.0
439,736 + 1.0
439,736 - -0.3
439,743 - 0.1
439,754 - -0.6
439,757 - 0.3
439,874 - 0.4
439,924 + 0.1
440,213 + 12095 mRNA_3727 0.16 -0.5
440,657 + 12095 mRNA_3727 0.43 -1.5
441,534 + -1.0
441,537 - 0.6
442,147 + 12096 mRNA_3728 0.22 0.1