Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3694

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3694: 12062 - K18334 fucD L-fuconate dehydratase, at 376601 to 378918 12062 mRNA_3695: 12063 - KOG1730 Thioredoxin-like protein, at 379073 to 379916 12063

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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376,431 - 0.2
376,439 - 0.2
376,459 - 0.4
376,523 + -0.2
376,647 + -0.0
376,748 - 1.0
376,935 - 12062 mRNA_3694 0.14 0.5
377,061 - 12062 mRNA_3694 0.20 -1.6
377,079 - 12062 mRNA_3694 0.21 0.3
377,085 + 12062 mRNA_3694 0.21 -0.3
377,583 - 12062 mRNA_3694 0.42 -1.6
377,645 - 12062 mRNA_3694 0.45 -0.8
377,662 + 12062 mRNA_3694 0.46 0.2
378,518 + 12062 mRNA_3694 0.83 -0.1
378,660 - 12062 mRNA_3694 0.89 -2.8
378,667 + 12062 mRNA_3694 0.89 -1.1
379,516 + 12063 mRNA_3695 0.52 -0.1
379,681 + 12063 mRNA_3695 0.72 -1.1
379,710 + 12063 mRNA_3695 0.75 -0.4
379,723 + 12063 mRNA_3695 0.77 0.3
379,823 + 12063 mRNA_3695 0.89 -0.7