Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3649

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3648: 12016 - K15448 TRM112, TRMT112 multifunctional methyltransferase subunit TRM112, at 252546 to 253342 12016 mRNA_3649: 12017 - HMMPfam-Protein of unknown function, DUF604-PF04646, at 253942 to 255854 12017 mRNA_3650: 12018 - Hypothetical Protein, at 256801 to 258115 12018

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
253,376 + 0.3
253,490 - -0.1
253,537 + 0.5
253,631 + 2.0
253,650 + -1.4
253,653 - 0.3
253,660 - -1.1
253,664 + -2.7
253,687 - -1.1
253,692 + -0.1
253,796 + 1.6
253,810 - 0.4
253,810 + -0.1
253,835 - -0.6
253,968 - -0.3
254,553 - 12017 mRNA_3649 0.32 -2.0
255,440 + 12017 mRNA_3649 0.78 0.8
255,552 - 12017 mRNA_3649 0.84 1.5
255,556 - 12017 mRNA_3649 0.84 -0.1
255,556 - 12017 mRNA_3649 0.84 -0.8
255,698 - 1.3
255,718 + 0.6
255,837 - -3.0
255,875 + 2.0
255,995 - -0.3
256,006 - -1.2
256,015 - -0.2
256,020 + 0.1
256,046 + -0.1
256,084 - 0.4
256,131 - -0.8
256,139 + -1.7
256,156 + -0.0
256,262 + 0.7
256,279 - 2.0
256,280 - -1.2
256,282 + 0.2
256,286 + -1.2
256,286 - 1.2
256,287 - 1.1
256,288 + -0.7
256,288 + 0.1
256,297 + 2.0
256,298 + -0.9
256,300 - 0.2
256,301 + 0.5
256,310 - 0.2
256,314 - 2.2
256,327 + -0.1
256,333 - -0.5
256,377 - -1.3
256,379 + 0.8
256,379 + 0.3
256,384 - 0.4
256,393 - 1.0
256,400 + 0.9
256,404 - 0.3
256,435 - -1.2
256,436 - -0.7
256,447 - 1.0
256,450 + -0.5
256,453 + -1.6
256,461 + -0.1
256,463 - 1.7
256,468 + -1.9
256,470 - -1.7
256,475 - -0.0
256,481 - 0.1
256,484 + 0.7
256,486 - 0.4
256,486 - -1.4
256,491 - 1.4
256,492 + -0.2
256,509 - 0.4
256,512 + -0.7
256,522 - 0.2
256,525 + 0.6
256,530 + -1.3
256,542 - -0.3
256,543 - 2.9
256,548 - -1.4
256,555 - -0.4
256,570 - -0.7
256,572 + 0.3
256,574 - 1.7
256,596 + 0.3
256,600 - -0.2
256,606 - 0.4
256,612 - -4.2
256,613 - -0.7
256,614 + 0.1
256,615 - 0.4
256,618 - 2.0
256,620 - 1.6
256,622 + -1.5
256,624 - -0.3
256,627 + -0.1
256,637 + -0.7
256,640 - -0.3
256,644 - -1.0
256,645 - 1.6
256,646 + -2.3
256,655 + -1.9
256,655 - -0.9
256,661 - 2.3
256,661 - 1.0
256,665 - 1.3
256,676 + -0.8
256,681 + 0.7
256,706 + 0.1
256,785 - -0.1
256,825 + -1.6
256,835 - -0.2