Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3640

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3639: 12007 - K11204 GCLC glutamate--cysteine ligase catalytic subunit, at 225683 to 228983 12007 mRNA_3640: 12008 - ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966, at 229768 to 230624 12008 mRNA_3641: 12009 - K17615 PPG1 serine/threonine-protein phosphatase PPG1, at 230658 to 231997 12009

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
228,996 + 0.7
229,004 + -0.1
229,012 + -1.6
229,121 - -0.8
229,139 - 0.8
229,140 + -0.8
229,281 - -0.2
229,282 + 0.1
229,289 - 0.5
229,291 + 0.2
229,292 + -0.4
229,298 - -1.3
229,299 + 1.0
229,302 + -0.1
229,314 + 1.0
229,317 + -1.3
229,320 + 0.4
229,326 - -0.3
229,326 - -0.0
229,327 + 0.1
229,596 + -2.7
229,750 - 0.7
229,868 + 12008 mRNA_3640 0.12 1.1
229,870 - 12008 mRNA_3640 0.12 1.9
229,872 - 12008 mRNA_3640 0.12 0.4
230,158 - 12008 mRNA_3640 0.46 -0.4
230,176 + 12008 mRNA_3640 0.48 -3.4
230,185 - 12008 mRNA_3640 0.49 -0.1
230,218 - 12008 mRNA_3640 0.53 -0.0
230,302 + 12008 mRNA_3640 0.62 -0.2
230,308 + 12008 mRNA_3640 0.63 -0.0
230,474 + 12008 mRNA_3640 0.82 0.4
230,495 + 12008 mRNA_3640 0.85 1.2
230,587 + -0.2
230,605 + 1.9
230,630 + 0.7
230,658 - 0.0
230,915 + 12009 mRNA_3641 0.19 -1.9
231,185 + 12009 mRNA_3641 0.39 3.2