Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3575

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3574: 11942 - ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 84191 to 85564 11942 mRNA_3575: 11943 - Hypothetical Protein, at 86235 to 86923 11943 mRNA_3576: 11944 - Hypothetical Protein, at 87392 to 87994 11944

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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85,317 + 11942 mRNA_3574 0.82 -1.5
85,639 + 0.6
85,663 + -1.2
85,975 - 1.8
86,126 - -3.3
86,232 - -1.8
86,396 - 11943 mRNA_3575 0.23 3.7
86,400 + 11943 mRNA_3575 0.24 -2.0
86,695 + 11943 mRNA_3575 0.67 0.1
86,821 + 11943 mRNA_3575 0.85 1.9
87,173 - 1.2
87,284 + 0.7
87,296 - -0.4
87,427 + -0.1
87,855 - 11944 mRNA_3576 0.77 1.2