Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3425

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3424: 11792 - Hypothetical Protein, at 64972 to 67736 11792 mRNA_3425: 11793 - K00789 metK S-adenosylmethionine synthetase, at 67905 to 69207 11793 mRNA_3426: 11794 - K08498 STX6 syntaxin 6, at 69287 to 70405 11794

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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67,038 - 11792 mRNA_3424 0.75 -0.4
67,090 - 11792 mRNA_3424 0.77 -1.4
67,372 - 11792 mRNA_3424 0.87 -0.3
67,477 - -0.2
67,491 - -2.7
67,504 + -1.1
67,663 + 0.0
67,927 - 2.2
68,074 + 11793 mRNA_3425 0.13 -0.9
68,118 + 11793 mRNA_3425 0.16 0.2
68,236 - 11793 mRNA_3425 0.25 2.3
68,610 + 11793 mRNA_3425 0.54 1.0
68,785 + 11793 mRNA_3425 0.68 0.6
68,918 + 11793 mRNA_3425 0.78 -0.3
68,932 + 11793 mRNA_3425 0.79 0.1
68,942 - 11793 mRNA_3425 0.80 -0.3
68,969 - 11793 mRNA_3425 0.82 0.4
69,111 + 0.7
69,117 + 1.4
69,130 - 0.9
69,134 + -0.5
69,153 + -0.3
69,254 + 1.2
69,257 + 2.3
69,423 - 11794 mRNA_3426 0.12 -0.0
69,569 - 11794 mRNA_3426 0.25 0.1
69,581 - 11794 mRNA_3426 0.26 -3.1
69,728 + 11794 mRNA_3426 0.39 -3.1
69,813 - 11794 mRNA_3426 0.47 -0.2
69,820 + 11794 mRNA_3426 0.48 0.3
69,867 + 11794 mRNA_3426 0.52 -0.9
69,896 - 11794 mRNA_3426 0.54 0.3
69,896 - 11794 mRNA_3426 0.54 -1.2
69,909 + 11794 mRNA_3426 0.56 1.2