Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3379

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3379: 11747 - Hypothetical Protein, at 537005 to 537944 11747 mRNA_3380: 11748 - KOG1650 Predicted K+/H+-antiporter, at 538274 to 541877 11748

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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536,061 + 0.2
536,183 - -1.8
536,186 - -0.6
536,194 - -1.1
536,195 - 0.2
536,349 - 0.9
536,504 - -1.3
536,506 + -0.3
536,535 - -1.4
536,536 + -0.2
536,613 - 0.2
536,815 + -1.0
536,819 + 0.0
536,950 - 0.3
536,975 + 0.6
536,999 + -0.3
537,072 - 0.2
537,072 - 0.5
537,078 + 1.8
537,078 + -0.1
537,263 - 11747 mRNA_3379 0.27 0.1
537,282 + 11747 mRNA_3379 0.29 2.2
537,427 + 11747 mRNA_3379 0.45 2.2
537,427 + 11747 mRNA_3379 0.45 0.7
537,427 + 11747 mRNA_3379 0.45 -1.7
537,433 + 11747 mRNA_3379 0.46 -0.2
537,522 - 11747 mRNA_3379 0.55 0.4
537,557 - 11747 mRNA_3379 0.59 0.1
537,614 + 11747 mRNA_3379 0.65 0.7
537,844 - 11747 mRNA_3379 0.89 -1.4
537,850 + 11747 mRNA_3379 0.90 0.8
537,960 + -0.1
538,116 - -0.7
538,127 + 2.5
538,240 + 0.9
538,441 - -0.0
538,573 - 0.4
538,704 + 11748 mRNA_3380 0.12 -2.4
538,706 + 11748 mRNA_3380 0.12 0.0
538,715 + 11748 mRNA_3380 0.12 -0.7
538,726 - 11748 mRNA_3380 0.13 -1.3
538,835 + 11748 mRNA_3380 0.16 0.2