Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3378

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3377: 11745 - KOG1516 Carboxylesterase and related proteins, at 531386 to 533428 11745 mRNA_3378: 11746 - KOG1516 Carboxylesterase and related proteins, at 533955 to 535983 11746

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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533,086 + 11745 mRNA_3377 0.83 0.1
533,088 - 11745 mRNA_3377 0.83 -0.0
533,089 + 11745 mRNA_3377 0.83 -2.2
533,308 - 1.8
533,453 - 0.8
533,453 - -2.5
533,524 - 2.1
533,608 - -1.0
533,990 + 0.1
534,033 - 0.6
534,080 - 1.1
534,399 - 11746 mRNA_3378 0.22 2.0
534,442 + 11746 mRNA_3378 0.24 1.1
534,647 + 11746 mRNA_3378 0.34 -0.2
534,674 - 11746 mRNA_3378 0.35 1.0
534,689 - 11746 mRNA_3378 0.36 0.7
534,847 + 11746 mRNA_3378 0.44 -1.0
534,966 - 11746 mRNA_3378 0.50 0.2
534,990 - 11746 mRNA_3378 0.51 -2.5
535,187 + 11746 mRNA_3378 0.61 1.4
535,463 - 11746 mRNA_3378 0.74 -0.0
535,911 + 0.8
536,061 + 0.2
536,183 - -1.8
536,186 - -0.6
536,194 - -1.1
536,195 - 0.2
536,349 - 0.9
536,504 - -1.3
536,506 + -0.3
536,535 - -1.4
536,536 + -0.2
536,613 - 0.2
536,815 + -1.0
536,819 + 0.0
536,950 - 0.3
536,975 + 0.6