Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3344

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3343: 11711 - HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 433717 to 434732 11711 mRNA_3344: 11712 - Hypothetical Protein, at 435281 to 435909 11712 mRNA_3345: 11713 - Hypothetical Protein, at 436771 to 439819 11713

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
434,344 - 11711 mRNA_3343 0.62 0.6
434,349 - 11711 mRNA_3343 0.62 -0.5
434,435 + 11711 mRNA_3343 0.71 -0.0
434,470 - 11711 mRNA_3343 0.74 -1.3
434,627 + 11711 mRNA_3343 0.90 -1.3
434,627 + 11711 mRNA_3343 0.90 0.6
434,637 + 2.8
434,637 + -0.4
434,642 - 1.0
434,653 + -0.3
434,758 - -1.3
434,771 - 0.1
434,771 - -0.9
434,780 - -1.6
434,788 - -0.0
434,788 + 1.4
434,793 - -0.6
434,793 - 0.7
434,794 - 0.1
434,795 - 0.5
434,797 - -0.7
434,798 - -0.6
434,801 + 0.7
434,806 - 2.1
434,806 - 1.0
434,808 - -0.8
434,810 + -0.0
434,810 - -0.2
434,810 - 0.8
434,811 - 0.9
434,811 - 0.6
434,811 - 0.7
434,814 + -1.3
434,818 - 2.2
434,818 + -0.0
434,820 - -0.8
434,825 + 0.3
434,826 + -0.5
434,835 - -0.8
434,836 + 1.2
434,838 + -0.2
434,839 - 0.4
434,846 + -0.4
434,847 + 0.6
434,851 + -0.9
434,859 + -0.0
434,861 + 1.0
434,862 - -1.0
434,864 + 0.3
434,864 + -0.0
434,901 - 0.5
434,915 - -0.5
434,932 - -0.6
434,933 + -0.7
434,936 + 0.1
434,965 - 0.0
434,968 - 0.6
434,972 - 0.4
434,980 + -0.5
434,982 + -0.8
434,985 - -0.0
434,989 + -2.1
434,994 - -2.7
435,007 - 0.2
435,007 + -1.2
435,008 - 0.1
435,009 + 0.3
435,009 - 0.5
435,014 - 1.5
435,017 - -0.6
435,021 - -0.2
435,022 + -0.8
435,022 + -0.7
435,022 + -2.5
435,022 + 0.6
435,031 - -1.2
435,037 + -0.8
435,039 - 0.6
435,041 - -0.1
435,043 + -0.2
435,044 + 0.9
435,055 + 0.3
435,056 - 1.1
435,057 + -0.2
435,062 - 0.2
435,062 - 0.5
435,067 - -0.1
435,068 - -1.3
435,072 - 0.6
435,077 - -1.2
435,084 - 0.8
435,089 + 2.4
435,092 - -1.3
435,101 + 1.8
435,105 + 0.5
435,184 + 0.9
435,188 - -0.8
435,214 + -0.4
435,218 + 0.3
435,242 + -0.5
435,254 - -0.5
435,270 + 0.7
435,366 - 11712 mRNA_3344 0.14 0.9
435,367 + 11712 mRNA_3344 0.14 0.6
435,386 - 11712 mRNA_3344 0.17 2.8
435,413 + 11712 mRNA_3344 0.21 -3.4
435,415 - 11712 mRNA_3344 0.21 -0.3
435,425 + 11712 mRNA_3344 0.23 -1.2
435,444 + 11712 mRNA_3344 0.26 1.3
435,480 - 11712 mRNA_3344 0.32 -0.2
435,551 - 11712 mRNA_3344 0.43 -0.7
435,558 + 11712 mRNA_3344 0.44 0.5
435,687 + 11712 mRNA_3344 0.65 0.3
435,708 - 11712 mRNA_3344 0.68 -1.8
435,942 - 0.2
436,000 + -1.2
436,006 - 0.1
436,024 - 1.0
436,030 + -0.6
436,100 - -1.0
436,112 + -1.3
436,114 - -0.7
436,130 - -0.8
436,132 - 1.2
436,179 + -1.0
436,179 - 1.3
436,180 + -1.0
436,202 - -0.6
436,212 - -0.7
436,229 - -0.0
436,235 + -1.9
436,238 + -0.4
436,240 + 1.6
436,240 + 0.7
436,242 - 1.6
436,242 - 1.1
436,242 - 1.2
436,250 + -0.0
436,250 + -0.4
436,272 + -0.6
436,275 + -0.9
436,278 + 0.2
436,288 + 0.5
436,297 - -0.6
436,303 + -1.2
436,320 + 1.6
436,321 - -0.4
436,325 + -0.1
436,329 + 0.0
436,332 - 0.2
436,332 - 1.8
436,339 - 0.3
436,342 - 0.5
436,356 - -1.4
436,358 + -0.3
436,457 - 1.6
436,458 - 0.7
436,460 + 0.6
436,471 - 0.2
436,476 - -1.2
436,494 + 0.7
436,505 + 0.5
436,508 - -1.5
436,523 + 0.9
436,526 + -0.1
436,530 - -0.5
436,532 + 1.4
436,557 + -1.5
436,674 + 0.2
436,689 - 0.0
436,787 - 1.7
436,816 + -0.2
436,839 + 0.6
436,841 + 1.0
436,875 + -3.4