Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3276

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3275: 11643 - BLAST methyltransferase [Obba rivulosa], at 265766 to 267917 11643 mRNA_3276: 11644 - BLAST Nuclease PA3 [Grifola frondosa], at 268106 to 268881 11644 mRNA_3277: 11645 - K14835 NOP2 ribosomal RNA methyltransferase Nop2, at 269606 to 272171 11645

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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267,199 - 11643 mRNA_3275 0.67 -1.1
267,485 - 11643 mRNA_3275 0.80 1.2
267,611 + 11643 mRNA_3275 0.86 0.6
267,679 - 11643 mRNA_3275 0.89 0.9
267,679 - 11643 mRNA_3275 0.89 0.2
267,805 - 1.3
268,219 - 11644 mRNA_3276 0.15 -1.3
268,350 + 11644 mRNA_3276 0.31 -0.2
268,351 - 11644 mRNA_3276 0.32 -0.4
268,364 + 11644 mRNA_3276 0.33 0.8
268,486 - 11644 mRNA_3276 0.49 -0.7
268,491 + 11644 mRNA_3276 0.50 -0.1
268,624 - 11644 mRNA_3276 0.67 -0.1
268,798 + 11644 mRNA_3276 0.89 3.0
268,884 - 0.1
268,899 + -0.3
268,908 + -1.1
268,916 - 0.2
268,917 - -2.4
268,918 + -2.1
268,938 + 0.2
268,953 - -1.1
268,953 + -0.7
268,957 + -0.3
268,963 - -2.3
269,083 - -0.8
269,096 + 1.4
269,098 + 0.2
269,099 - -0.3
269,101 - 2.2
269,103 - -0.1
269,105 - -0.1
269,106 - 0.2
269,112 + 0.1
269,116 - 0.6
269,118 + 1.5
269,130 + 1.8
269,238 + 0.2
269,240 + -1.4
269,378 + 0.9
269,393 - 1.1
269,401 + 0.6
269,409 - 0.1
269,409 + -0.3
269,411 - 0.1
269,518 - 0.7