Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3247

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3246: 11614 - Hypothetical Protein, at 205429 to 207188 11614 mRNA_3247: 11615 - Hypothetical Protein, at 207586 to 209247 11615 mRNA_3248: 11616 - Hypothetical Protein, at 210155 to 211275 11616

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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206,716 - 11614 mRNA_3246 0.73 -0.4
206,970 - 11614 mRNA_3246 0.88 -2.8
206,989 + 11614 mRNA_3246 0.89 -1.4
207,159 - 1.7
207,285 - 1.3
207,317 + -0.6
207,327 - -1.0
207,356 + 0.5
207,427 - -1.5
207,605 - -0.3
207,618 - -0.9
207,634 + -1.9
207,730 + -0.4
207,734 + 0.4
207,865 - 11615 mRNA_3247 0.17 -1.2
207,926 - 11615 mRNA_3247 0.20 1.0
207,984 + 11615 mRNA_3247 0.24 0.8
208,012 + 11615 mRNA_3247 0.26 0.2
208,307 + 11615 mRNA_3247 0.43 1.6
208,320 + 11615 mRNA_3247 0.44 0.3
208,328 + 11615 mRNA_3247 0.45 -0.9
208,356 + 11615 mRNA_3247 0.46 -0.6
208,471 + 11615 mRNA_3247 0.53 1.4
208,489 + 11615 mRNA_3247 0.54 -0.2
208,490 + 11615 mRNA_3247 0.54 -0.5
208,599 - 11615 mRNA_3247 0.61 1.5
208,609 + 11615 mRNA_3247 0.62 -0.3
208,770 + 11615 mRNA_3247 0.71 -0.3
208,773 - 11615 mRNA_3247 0.71 -0.9
208,930 + 11615 mRNA_3247 0.81 -1.1
208,973 - 11615 mRNA_3247 0.83 -0.3
209,234 + 1.0
209,383 - -0.2
209,590 - -0.3
209,591 + -0.4
209,646 - 0.2
209,760 + 0.5
209,764 - -0.8
209,766 - -0.6
209,772 - 1.3
209,806 + -1.9
209,829 - 0.5
209,894 + -2.0
209,916 + 0.3
210,021 + 0.2
210,028 - 0.3
210,028 - -1.5
210,176 - 0.0