Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3214

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3213: 11581 - HMMPfam-Tubulin domain-PF14881,SUPERFAMILY--SSF52490, at 106539 to 109229 11581 mRNA_3214: 11582 - KOG3989 Beta-2-glycoprotein I, at 109628 to 110560 11582 mRNA_3215: 11583 - K17103 CHO1, pssA CDP-diacylglycerol---serine O-phosphatidyltransferase, at 110757 to 112157 11583

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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109,466 - 2.4
109,495 - 0.1
109,909 + 11582 mRNA_3214 0.30 -1.9
110,513 - 0.2
110,664 + -1.5
110,686 + 0.0