Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3071

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3071: 11439 - Hypothetical Protein, at 245578 to 247225 11439 mRNA_3072: 11440 - KOG1203 Predicted dehydrogenase, at 248202 to 249247 11440

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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244,721 - 1.0
244,732 - -0.4
244,839 - 0.0
244,865 + 0.6
244,987 + -2.3
245,018 + 0.4
245,171 - 1.5
245,277 - 0.1
245,292 + 1.0
245,331 - 1.3
245,460 + -0.9
245,873 + 11439 mRNA_3071 0.18 0.8
246,163 + 11439 mRNA_3071 0.35 1.5
246,296 - 11439 mRNA_3071 0.44 0.2
246,359 - 11439 mRNA_3071 0.47 -1.7
246,440 - 11439 mRNA_3071 0.52 -0.2
246,462 - 11439 mRNA_3071 0.54 0.5
246,473 + 11439 mRNA_3071 0.54 -1.1
246,568 + 11439 mRNA_3071 0.60 0.5
246,578 - 11439 mRNA_3071 0.61 0.5
246,579 - 11439 mRNA_3071 0.61 -0.3
246,584 + 11439 mRNA_3071 0.61 -0.8
246,584 + 11439 mRNA_3071 0.61 0.1
246,584 + 11439 mRNA_3071 0.61 0.7
246,584 + 11439 mRNA_3071 0.61 -1.7
246,584 + 11439 mRNA_3071 0.61 0.4
246,584 + 11439 mRNA_3071 0.61 -0.7
246,584 + 11439 mRNA_3071 0.61 -0.1
246,620 + 11439 mRNA_3071 0.63 -0.1
246,657 + 11439 mRNA_3071 0.65 0.3
246,696 - 11439 mRNA_3071 0.68 -0.9
246,753 - 11439 mRNA_3071 0.71 -0.0
246,753 + 11439 mRNA_3071 0.71 -1.2
246,828 + 11439 mRNA_3071 0.76 0.1
246,865 + 11439 mRNA_3071 0.78 0.9
246,934 - 11439 mRNA_3071 0.82 1.0
247,161 + -0.4
247,284 + 0.2
247,294 - -0.7
247,297 + -0.2
247,311 - 0.6
247,313 - -1.8
247,314 + 0.4
247,444 - -0.3
247,467 - -1.2
247,589 - 0.5
247,597 - -0.5
247,599 + 0.9
247,603 - 0.9
247,605 + -1.4
247,615 + -0.1
247,617 - 0.1
247,618 - -0.1
247,620 + 0.4
247,623 + -1.3
247,625 - -0.1
247,745 + 1.6
247,757 + -0.1
247,765 - 1.5
247,771 + -0.1
247,868 + 0.4
247,908 - -1.2
247,917 - -1.1
247,922 + 1.1
248,052 - -0.4
248,054 - -0.5
248,064 + -0.5
248,077 - -0.4