Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3070

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3069: 11437 - KOG2505 Ankyrin repeat protein, at 239616 to 241978 11437 mRNA_3070: 11438 - Hypothetical Protein, at 242213 to 243874 11438

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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241,480 + 11437 mRNA_3069 0.79 -0.7
241,489 - 11437 mRNA_3069 0.79 1.0
241,624 - 11437 mRNA_3069 0.85 1.4
241,884 - 1.5
241,901 + 1.7
242,051 + 0.4
242,545 + 11438 mRNA_3070 0.20 0.8
242,644 + 11438 mRNA_3070 0.26 0.7
242,662 - 11438 mRNA_3070 0.27 -1.1
242,963 - 11438 mRNA_3070 0.45 2.3
243,067 + 11438 mRNA_3070 0.51 0.4
243,076 + 11438 mRNA_3070 0.52 1.3
243,356 - 11438 mRNA_3070 0.69 1.2
243,638 + 11438 mRNA_3070 0.86 0.3
243,642 - 11438 mRNA_3070 0.86 -1.1
243,645 - 11438 mRNA_3070 0.86 0.1
243,659 + 11438 mRNA_3070 0.87 -2.1
243,676 + 11438 mRNA_3070 0.88 0.2
243,681 - 11438 mRNA_3070 0.88 1.1
243,795 - -0.0
243,798 - -2.1
243,813 - 1.0
243,817 + -1.9
243,835 + 0.7
243,864 + 0.8
243,949 - -0.2
244,060 + 1.6
244,104 - 0.4
244,124 + 0.2
244,132 - -1.3
244,133 - 0.6
244,154 + -1.2
244,162 + 0.3
244,235 + -3.9
244,251 + -0.5
244,255 + 0.9
244,256 - 0.7
244,257 - 0.1
244,260 + 0.0
244,262 + -0.4
244,263 - 0.6
244,266 + -0.8
244,272 - 1.0
244,274 - -1.4
244,274 + -2.0
244,277 + 0.2
244,278 + -1.2
244,281 - 0.8
244,282 + -1.1
244,283 - 0.3
244,286 + 0.3
244,290 + -0.3
244,290 - 0.0
244,292 + -0.6
244,292 + -0.6
244,300 + 0.0
244,331 + 1.6
244,393 + -1.1
244,438 + 0.7
244,440 - 0.3
244,721 - 1.0
244,732 - -0.4
244,839 - 0.0
244,865 + 0.6