Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3044

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3044: 11412 - K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1, at 177701 to 181469 11412

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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176,758 + -0.0
176,899 - -0.4
176,910 + 0.5
176,932 + -0.4
176,938 - -0.2
177,075 - -0.9
177,089 + -1.3
177,250 + -0.5
177,395 + -1.5
177,417 + -1.6
177,542 + -0.5
177,663 + -1.1
177,818 - 0.0
177,941 + 0.1
178,014 - -1.4
178,939 + 11412 mRNA_3044 0.33 -1.8
179,084 - 11412 mRNA_3044 0.37 0.3
179,272 - 11412 mRNA_3044 0.42 1.3
179,552 - 11412 mRNA_3044 0.49 -0.2
179,563 - 11412 mRNA_3044 0.49 -2.2
179,570 + 11412 mRNA_3044 0.50 -1.3
179,701 - 11412 mRNA_3044 0.53 2.0
179,808 + 11412 mRNA_3044 0.56 1.4
180,261 + 11412 mRNA_3044 0.68 0.4
180,464 + 11412 mRNA_3044 0.73 0.4
181,025 - 11412 mRNA_3044 0.88 -1.3
181,237 + -0.2
181,468 + 0.7
181,547 + 0.7
181,961 - -1.5
182,153 - 0.1
182,254 + -0.4