Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3034

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3034: 11402 - K05767 IQGAP2_3 Ras GTPase-activating-like protein IQGAP2/3, at 148393 to 151658 11402 mRNA_3035: 11403 - K03661 ATPeV0B, ATP6F V-type H+-transporting ATPase 21kDa proteolipid subunit, at 151976 to 152968 11403

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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147,413 - 0.1
147,524 - 1.8
147,799 + 0.3
147,977 + -0.1
147,990 - 1.1
148,016 + -1.6
148,026 + -0.1
148,031 + 0.2
148,040 + 0.0
148,065 + -0.1
148,093 - -0.1
148,118 - 2.3
148,122 - -1.9
148,132 - 0.3
148,142 + 1.3
148,142 + -0.5
148,299 - -0.5
148,301 - -0.7
148,422 + -0.4
148,428 + -0.4
148,453 + 0.2
148,582 - -1.1
148,700 + -0.5
148,727 + 11402 mRNA_3034 0.10 0.5
148,832 - 11402 mRNA_3034 0.13 -2.3
148,992 + 11402 mRNA_3034 0.18 1.0
149,009 - 11402 mRNA_3034 0.19 0.3
149,018 - 11402 mRNA_3034 0.19 0.5
149,027 + 11402 mRNA_3034 0.19 -0.5
149,191 - 11402 mRNA_3034 0.24 -0.8
150,187 - 11402 mRNA_3034 0.55 0.5
150,340 + 11402 mRNA_3034 0.60 -1.7
150,346 + 11402 mRNA_3034 0.60 0.1
150,889 - 11402 mRNA_3034 0.76 -1.1
151,009 + 11402 mRNA_3034 0.80 -0.5
151,253 - 11402 mRNA_3034 0.88 1.6
151,604 - -1.1
151,652 - -0.2
151,769 + 0.4
151,874 + -0.5