Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3005

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3004: 11372 - K12624 LSM5 U6 snRNA-associated Sm-like protein LSm5, at 53581 to 54123 11372 mRNA_3005: 11373 - K19708 PTC6, AUP1 protein phosphatase PTC6, at 54754 to 56074 11373 mRNA_3006: 11374 - K03259 EIF4E translation initiation factor 4E, at 56733 to 57511 11374

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
54,193 - 3.0
54,311 + -1.7
54,369 - -1.7
54,514 + 0.2
54,655 + -0.4
54,855 + -0.6
55,088 + 11373 mRNA_3005 0.25 0.3
55,234 + 11373 mRNA_3005 0.36 -0.0
55,569 - 11373 mRNA_3005 0.62 0.1
55,962 + 2.3
55,991 + -0.2
56,184 - 0.6
56,241 + 0.7
56,532 + 1.6
56,572 + -3.9
56,723 - 1.2
56,876 + 11374 mRNA_3006 0.18 0.3
56,979 + 11374 mRNA_3006 0.32 -0.0