Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2998

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2997: 11365 - K14768 UTP7, WDR46 U3 small nucleolar RNA-associated protein 7, at 39217 to 41331 11365 mRNA_2998: 11366 - KOG3383 Uncharacterized conserved protein, at 41514 to 42818 11366 mRNA_2999: 11367 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 43195 to 45486 11367

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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41,387 + 1.4
41,392 + 1.8
41,474 + -2.5
41,479 - 1.5
41,531 + 2.2
41,644 - 2.8
41,783 + 11366 mRNA_2998 0.21 -1.5
41,918 - 11366 mRNA_2998 0.31 2.5
41,944 + 11366 mRNA_2998 0.33 -1.1
42,217 + 11366 mRNA_2998 0.54 0.1
42,221 - 11366 mRNA_2998 0.54 -0.6
42,227 - 11366 mRNA_2998 0.55 0.5
42,397 + 11366 mRNA_2998 0.68 -1.1
42,602 - 11366 mRNA_2998 0.83 -1.2
42,633 - 11366 mRNA_2998 0.86 -0.4
42,918 + 0.2
43,254 + -0.0
43,254 + 0.5
43,407 + 1.3
43,520 + 11367 mRNA_2999 0.14 1.5
43,547 - 11367 mRNA_2999 0.15 -0.2