Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2991

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2990: 11358 - SUPERFAMILY--SSF52047, at 21801 to 25370 11358 mRNA_2991: 11359 - SUPERFAMILY--SSF50685, at 25748 to 27268 11359 mRNA_2992: 11360 - Hypothetical Protein, at 27862 to 28502 11360

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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25,089 + -0.6
25,386 - 1.2
25,389 - 0.4
25,415 - -0.1
25,430 + 2.1
25,430 + -0.5
25,547 - -0.0
25,560 - -0.7
25,564 - 1.5
25,565 + 1.2
25,569 - -2.5
25,582 + -1.0
25,587 - 0.9
25,588 + -0.1
25,889 - 1.3
26,023 + 11359 mRNA_2991 0.18 -1.5
26,023 + 11359 mRNA_2991 0.18 1.2
26,148 - 11359 mRNA_2991 0.26 0.8
26,279 - 11359 mRNA_2991 0.35 -0.9
26,297 + 11359 mRNA_2991 0.36 -1.1
26,415 - 11359 mRNA_2991 0.44 -1.1
26,631 + 11359 mRNA_2991 0.58 -0.1
26,899 + 11359 mRNA_2991 0.76 0.3
26,941 - 11359 mRNA_2991 0.78 1.6
27,032 + 11359 mRNA_2991 0.84 0.6
27,036 + 11359 mRNA_2991 0.85 1.6
27,163 + -0.3
27,297 - 0.7
27,305 - -0.1
27,327 + -1.9
27,453 + 0.0
27,474 + -1.0
27,485 + 1.1
27,500 + 1.0
27,622 - 0.3
27,774 + -0.0
27,796 + 1.8